The detailed information of tRNA gene sequence


Sequence ID>SRA1014617
Genome IDSRR023845.228920
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 171
End posion on genome 97
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnntaaac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCATCGGTTCGAC
TCCGATATTCTCCACtc
Downstream region at tRNA end position 
ccgtttcaaa
Secondary structure (Cloverleaf model)
>SRA1014617	Ala	GGC
                   c      ACtc ccgtttcaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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