The detailed information of tRNA gene sequence


Sequence ID>SRA1014642
Genome IDSRR023845.237786
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 190
End posion on genome 106
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cggcgggcat
tRNA gene sequence 
GCGGGCGTGGTGGAATTGGTAGACGCGCCGGACTCAAAATCCGGTTCCGCAAGGAGTGTC
GGTTCGACCCCGACCGCCCGCACCA
Downstream region at tRNA end position 
ccgtatcagt
Secondary structure (Cloverleaf model)
>SRA1014642	Leu	CAA
                   t      ACCA ccgtatcagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C C
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGCAAGGAGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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