The detailed information of tRNA gene sequence


Sequence ID>SRA1014646
Genome IDSRR023845.239501
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 86
End posion on genome 13
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcgccggtga
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGTTACGCAGAGGACTGCAAATCCTTGCATCCCGGTTCGATTCC
GGGCGAGGCCTCCA
Downstream region at tRNA end position 
gcttttttcc
Secondary structure (Cloverleaf model)
>SRA1014646	Cys	GCA
                   a      TCCA gcttttttcc
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GCAT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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