The detailed information of tRNA gene sequence


Sequence ID>SRA1014668
Genome IDSRR023845.251439
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 173
End posion on genome 246
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
taattaacct
tRNA gene sequence 
TCCCATATAGTCTAGGCGGTTAGGATAGCTGGCTCTCACCCAGCAGACCCGGGTTCGAGT
CCCGGTGTGGGAACat
Downstream region at tRNA end position 
cttttgcttt
Secondary structure (Cloverleaf model)
>SRA1014668	Glu	CTC
                   t      ACat cttttgcttt
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T G
                    T     G G C C C     A
      G G A        A      | | | | |     G
    C       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     AGAC
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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