The detailed information of tRNA gene sequence


Sequence ID>SRA1014680
Genome IDSRR023845.260346
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 104
End posion on genome 178
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tggttctgcT
tRNA gene sequence 
GGGCGCATAGCGCAGTGGTAGCGCGTCCGCTTTGCAAGCGGAAGGCCCCGGGTTCAATCC
CCGGTGTGTCCAACt
Downstream region at tRNA end position 
ctttatgcga
Secondary structure (Cloverleaf model)
>SRA1014680	Ala	TGC
                   T      AACt ctttatgcga
                     G - C
                     G - C
                     G + T
                     C - G
                     G + T
                     C - G
                     A - T          C T
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     C G C G       C C G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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