The detailed information of tRNA gene sequence


Sequence ID>SRA1014687
Genome IDSRR023845.263639
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 168
End posion on genome 92
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accaaaacag
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCACAGGATTCATAACCCTGAGGTCACGAGTTCAAC
TCTCGTCCCCGCTACAA
Downstream region at tRNA end position 
gtaaaaaacg
Secondary structure (Cloverleaf model)
>SRA1014687	Met	CAT
                   g      ACAA gtaaaaaacg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     T G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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