The detailed information of tRNA gene sequence


Sequence ID>SRA1014696
Genome IDSRR023845.268011
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 8
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnntccctgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGNAACCA
Downstream region at tRNA end position 
aataccaaac
Secondary structure (Cloverleaf model)
>SRA1014696	Met	CAT
                   g      ACCA aataccaaac
                     C   A
                     G   N
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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