The detailed information of tRNA gene sequence


Sequence ID>SRA1014726
Genome IDSRR023845.284720
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 128
End posion on genome 39
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accgaacgct
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
tcgagctcag
Secondary structure (Cloverleaf model)
>SRA1014726	Ser	GGA
                   t      GCCA tcgagctcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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