The detailed information of tRNA gene sequence


Sequence ID>SRA1014782
Genome IDSRR023845.313043
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 157
End posion on genome 81
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggaccctat
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
aattcctcaa
Secondary structure (Cloverleaf model)
>SRA1014782	Met	CAT
                   t      ACCA aattcctcaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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