The detailed information of tRNA gene sequence


Sequence ID>SRA1014802
Genome IDSRR023845.319635
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 187
End posion on genome 98
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcgccccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGATTGTACCGCACTCGAAATGCGGCATGGGTGCAAGCCCA
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
atcagcccgt
Secondary structure (Cloverleaf model)
>SRA1014802	Ser	CGA
                   c      GCCA atcagcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | +                 T T
    T       T T G T
      T G A        A     CATGGGTGCAAGCCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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