The detailed information of tRNA gene sequence


Sequence ID>SRA1014824
Genome IDSRR023845.331065
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 181
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcgtttgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acgcacacga
Secondary structure (Cloverleaf model)
>SRA1014824	Met	CAT
                   g      ACCA acgcacacga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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