The detailed information of tRNA gene sequence


Sequence ID>SRA1014826
Genome IDSRR023845.331886
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 73
End posion on genome -1
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgcgccgt
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTCAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCANNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1014826	Trp	CCA
                   t      NNnn nnnnnnnnnn
                     A   A
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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