The detailed information of tRNA gene sequence


Sequence ID>SRA1014832
Genome IDSRR023845.334703
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 61
End posion on genome 132
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agggttcgac
tRNA gene sequence 
GCGCGGGTAGCTCAGTGGTAGAGCGTTCGATTGCAGCTCGAAGGGTCACTGGTTCAATCC
CGGTCCCGCGCTtct
Downstream region at tRNA end position 
tgttcttgtc
Secondary structure (Cloverleaf model)
>SRA1014832	Cys	GCA
                   c      Ttct tgttcttgtc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          C T
                    T     T G G C C     A
        G A        A      | | + | |     A
      T     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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