The detailed information of tRNA gene sequence


Sequence ID>SRA1014887
Genome IDSRR023845.364466
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 114
End posion on genome 203
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgccgatcc
tRNA gene sequence 
GGAGACGTGGGTGAGCGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tctgcccgtc
Secondary structure (Cloverleaf model)
>SRA1014887	Ser	GCT
                   c      GCCA tctgcccgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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