The detailed information of tRNA gene sequence


Sequence ID>SRA1014890
Genome IDSRR023845.365064
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 289
End posion on genome 213
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nncgtttggc
tRNA gene sequence 
GGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acgcccatca
Secondary structure (Cloverleaf model)
>SRA1014890	Met	CAT
                   c      ACCA acgcccatca
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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