The detailed information of tRNA gene sequence


Sequence ID>SRA1014901
Genome IDSRR023845.373227
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 103
End posion on genome 26
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcagcgaT
tRNA gene sequence 
GGGCTTGTAACTCAGTTGGTTAGAGTGCCTGACTCATAATCAGTAAGTCCCTGGTTCGAG
TCCAGGCTGGCCCACCC
Downstream region at tRNA end position 
tcataatcag
Secondary structure (Cloverleaf model)
>SRA1014901	Met	CAT
                   T      ACCC tcataatcag
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T   T
                     G - C          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C A       C C T G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     AAGTC
                    C   T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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