The detailed information of tRNA gene sequence


Sequence ID>SRA1014940
Genome IDSRR023845.391127
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 106
End posion on genome 17
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggaacggtgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCCGGAAGGGTA
TCGTGGGTTCGAATCCCATCTTCTCCGCCA
Downstream region at tRNA end position 
ttattttgcc
Secondary structure (Cloverleaf model)
>SRA1014940	Ser	GCT
                   c      GCCA ttattttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCCGGAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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