The detailed information of tRNA gene sequence


Sequence ID>SRA1014953
Genome IDSRR023845.395622
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 82
End posion on genome 8
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccgtcgcga
tRNA gene sequence 
GGGGCGGTAGCTCAGCCGGTTAGAGCAGTCGACTCATAATCGATCGGTCACGGGTTCAAG
TCCCGTCCGCCCTACtc
Downstream region at tRNA end position 
gtcaannnnn
Secondary structure (Cloverleaf model)
>SRA1014953	Met	CAT
                   a      ACtc gtcaannnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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