The detailed information of tRNA gene sequence


Sequence ID>SRA1014974
Genome IDSRR023845.404342
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 243
End posion on genome 167
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cgcccgcagt
tRNA gene sequence 
GCCGCTGTAGCTCAGTTGGTTAGAGCGCTTGATTGTGGATCAAGAGGTCCCCCGTTCGAG
CCGGGGCAGTGGTACCA
Downstream region at tRNA end position 
ttccttctcg
Secondary structure (Cloverleaf model)
>SRA1014974	His	GTG
                   t      ACCA ttccttctcg
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     T - A
                     G - C          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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