The detailed information of tRNA gene sequence


Sequence ID>SRA1014993
Genome IDSRR023845.416425
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 215
End posion on genome 141
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gatacaaaaa
tRNA gene sequence 
GCTTCCTTAGCTCAGCCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCCTGGTTCGAG
CCCAGGAGGGAGCGCtt
Downstream region at tRNA end position 
ttacttaaaa
Secondary structure (Cloverleaf model)
>SRA1014993	Asn	GTT
                   a      GCtt ttacttaaaa
                     G - C
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A          C G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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