The detailed information of tRNA gene sequence


Sequence ID>SRA1015002
Genome IDSRR023845.419601
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 212
End posion on genome 125
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcagcggct
tRNA gene sequence 
GGAGCGATGGCCGAGTGGTCGAAGGCGCCTGACTCGAAATCAGGTGTGCCGAAAGGTACC
GGGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
gcgctgcaca
Secondary structure (Cloverleaf model)
>SRA1015002	Ser	CGA
                   t      GCCA gcgctgcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGCCGAAAGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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