The detailed information of tRNA gene sequence


Sequence ID>SRA1015007
Genome IDSRR023845.421275
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 136
End posion on genome 212
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgacgacat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGGAGTTCAAA
TCTCTCCCTCGCTACCA
Downstream region at tRNA end position 
agtttcctaa
Secondary structure (Cloverleaf model)
>SRA1015007	Met	CAT
                   t      ACCA agtttcctaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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