The detailed information of tRNA gene sequence


Sequence ID>SRA1015019
Genome IDSRR023845.424571
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 31
End posion on genome 105
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atctgctaac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGACGCCCTCTCACGGCGTAAGCACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
gcacttttcc
Secondary structure (Cloverleaf model)
>SRA1015019	Glu	CTC
                   c      ACCA gcacttttcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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