The detailed information of tRNA gene sequence


Sequence ID>SRA1015020
Genome IDSRR023845.424681
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 128
End posion on genome 220
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagccctgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTAAAGGGAGATAATCC
CTTTCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
cttcacttta
Secondary structure (Cloverleaf model)
>SRA1015020	Ser	GCT
                   c      GCCA cttcacttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAAAGGGAGATAATCCCTTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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