The detailed information of tRNA gene sequence


Sequence ID>SRA1015031
Genome IDSRR023845.426254
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 91
End posion on genome 180
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gattacctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAACGTACCGCACTCGAAATGCGGCGTACCCGCGAGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttattccct
Secondary structure (Cloverleaf model)
>SRA1015031	Ser	CGA
                   c      GCCA tttattccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G           | +                 T T
    T       A C G T
      C G A        A     CGTACCCGCGAGGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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