The detailed information of tRNA gene sequence


Sequence ID>SRA1015041
Genome IDSRR023845.433197
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 200
End posion on genome 276
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgcctacgcg
tRNA gene sequence 
GCGGTCGTAGTTCAATTGGTTAGAGCGTCGGCTTGTGATGCCGGATGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position 
ttttccctta
Secondary structure (Cloverleaf model)
>SRA1015041	His	GTG
                   g      CCCA ttttccctta
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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