The detailed information of tRNA gene sequence


Sequence ID>SRA1015048
Genome IDSRR023845.435741
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 54
End posion on genome 143
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcggttttaa
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTGAGAGCGTA
TCGCGGGTTCGAATCCCGCTCTGTCCGCCA
Downstream region at tRNA end position 
tgctcatcaa
Secondary structure (Cloverleaf model)
>SRA1015048	Ser	GGA
                   a      GCCA tgctcatcaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTGAGAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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