The detailed information of tRNA gene sequence


Sequence ID>SRA1015053
Genome IDSRR023845.441448
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 188
End posion on genome 263
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cggcgcgtcc
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGCGGTTCGAGC
CCGTCACCGCCCACCA
Downstream region at tRNA end position 
ccgacttcca
Secondary structure (Cloverleaf model)
>SRA1015053	Val	TAC
                   c      ACCA ccgacttcca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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