The detailed information of tRNA gene sequence


Sequence ID>SRA1015068
Genome IDSRR023845.446639
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 190
End posion on genome 114
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aacaagtaat
tRNA gene sequence 
CGGGAAGTGGCTCAGTTTGGTAGAGCATTCGGTTTGGGACCGAAGGGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
ttataataat
Secondary structure (Cloverleaf model)
>SRA1015068	Pro	TGG
                   t      ACCA ttataataat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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