The detailed information of tRNA gene sequence


Sequence ID>SRA1015077
Genome IDSRR023845.451081
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 108
End posion on genome 16
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgctgcgacc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACCGGGTTTACTG
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttttgcactg
Secondary structure (Cloverleaf model)
>SRA1015077	Ser	GCT
                   c      GCCA ttttgcactg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCGGGTTTACTGGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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