The detailed information of tRNA gene sequence


Sequence ID>SRA1015082
Genome IDSRR023845.453781
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 163
End posion on genome 239
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tgcctacgcg
tRNA gene sequence 
GCGGTCGTAGTTCAATTGGTTAGAGCGTCGGCTTGTGATGCCGGATGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position 
ttttcccatt
Secondary structure (Cloverleaf model)
>SRA1015082	His	GTG
                   g      CCCA ttttcccatt
                     G - C
                     C - G
                     G - C
                     G + T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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