The detailed information of tRNA gene sequence


Sequence ID>SRA1015127
Genome IDSRR023845.469943
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 170
End posion on genome 99
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacagtaaa
tRNA gene sequence 
AAGAGTATAGTTTAATTGGTAAAATAGGAAGCTTCAAACTTCAAATTTCCAGTTCAAGTC
TGGATGCTCTTGtta
Downstream region at tRNA end position 
taacataatg
Secondary structure (Cloverleaf model)
>SRA1015127	SeC	TCA
                   a      Gtta taacataatg
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T G
                    T     A G G T C     A
      T A A        A      | | | | |     A
    T       T T T G       T C C A G     C
    G       | | | +                 T T
    G       A A A T
      T A          A     AATT
                    G   A
                    G - C
                    A - T
                    A - T
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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