The detailed information of tRNA gene sequence


Sequence ID>SRA1015140
Genome IDSRR023845.475668
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 198
End posion on genome 274
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tccgtcctcg
tRNA gene sequence 
GGGCGATTAGCTCAGTCGGTTAGAGCGCTTCTCTGATAAGGAAGAGGTCCCTGGTTCGAA
TCCAGGATCGCCCACTA
Downstream region at tRNA end position 
cgaacggccc
Secondary structure (Cloverleaf model)
>SRA1015140	Ile	GAT
                   g      ACTA cgaacggccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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