The detailed information of tRNA gene sequence


Sequence ID>SRA1015160
Genome IDSRR023845.481770
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 246
End posion on genome 170
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcaacgat
tRNA gene sequence 
GGGCTTGTAACTCAGTTGGTTAGAGTGCCTGACTCATAATCAGTAAGTCCCAGGTTCGAG
CCCTGGCTGGCCCACGA
Downstream region at tRNA end position 
acacgatcaa
Secondary structure (Cloverleaf model)
>SRA1015160	Met	CAT
                   t      ACGA acacgatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T   T
                     G - C          C G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C A       C C A G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     AAGTC
                    C   T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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