The detailed information of tRNA gene sequence


Sequence ID>SRA1015164
Genome IDSRR023845.483056
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccgtgccgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
aattccaaac
Secondary structure (Cloverleaf model)
>SRA1015164	Met	CAT
                   t      ACCA aattccaaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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