The detailed information of tRNA gene sequence


Sequence ID>SRA1015172
Genome IDSRR023845.486524
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 148
End posion on genome 72
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttagtaaaac
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
gcatcactga
Secondary structure (Cloverleaf model)
>SRA1015172	Asp	GTC
                   c      GCCA gcatcactga
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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