The detailed information of tRNA gene sequence


Sequence ID>SRA1015183
Genome IDSRR023845.490807
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gatcggtcgc
tRNA gene sequence 
GCGCCCGTAGCTCAGTCGGATAGAGCACGAGCCTTCTAAGCTTGGGGCCGCTGGTTCGAA
TCCAGCCGGGCGCGCCA
Downstream region at tRNA end position 
atcaannnnn
Secondary structure (Cloverleaf model)
>SRA1015183	Arg	TCT
                   c      GCCA atcaannnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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