The detailed information of tRNA gene sequence


Sequence ID>SRA1015227
Genome IDSRR023845.507267
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 61
End posion on genome 137
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttcgacat
tRNA gene sequence 
GGCAGCGTAGCTCAGTTGGTTAGAGCACCGGACTCATAACCCGGGGGTCGGCAGTTCAAA
TCTGCCCGCTGCTACCA
Downstream region at tRNA end position 
tcgaccacct
Secondary structure (Cloverleaf model)
>SRA1015227	Met	CAT
                   t      ACCA tcgaccacct
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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