The detailed information of tRNA gene sequence


Sequence ID>SRA1015233
Genome IDSRR023845.511108
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 67
End posion on genome 142
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatagacgtg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGCAGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ctctctccgc
Secondary structure (Cloverleaf model)
>SRA1015233	Met	CAT
                   g      ACCA ctctctccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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