The detailed information of tRNA gene sequence


Sequence ID>SRA1015237
Genome IDSRR023845.514000
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 107
End posion on genome 32
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gactggttat
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACCAGCCTTTCACGTTGGTAACACGGGTTCGAAT
CCCGTTGGGGATGCCA
Downstream region at tRNA end position 
ttcaatgagg
Secondary structure (Cloverleaf model)
>SRA1015237	Glu	TTC
                   t      GCCA ttcaatgagg
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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