The detailed information of tRNA gene sequence


Sequence ID>SRA1015239
Genome IDSRR023845.514677
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 5
End posion on genome 80
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnttga
tRNA gene sequence 
AGGGGTATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
cctgaagtgg
Secondary structure (Cloverleaf model)
>SRA1015239	Trp	CCA
                   a      GCCA cctgaagtgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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