The detailed information of tRNA gene sequence


Sequence ID>SRA1015245
Genome IDSRR023845.517475
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 52
End posion on genome 126
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tccaccggac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGTCGCCCTCTCACGGCGAAAACACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
gcggcggctt
Secondary structure (Cloverleaf model)
>SRA1015245	Glu	CTC
                   c      ACCA gcggcggctt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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