The detailed information of tRNA gene sequence


Sequence ID>SRA1015248
Genome IDSRR023845.519296
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 266
End posion on genome 190
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnntatgc
tRNA gene sequence 
GCGGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCCGCGCCA
Downstream region at tRNA end position 
tttttctcca
Secondary structure (Cloverleaf model)
>SRA1015248	Asp	GTC
                   c      GCCA tttttctcca
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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