The detailed information of tRNA gene sequence


Sequence ID>SRA1015283
Genome IDSRR023845.539610
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 42
End posion on genome 115
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctcgcggcgt
tRNA gene sequence 
GCCCCGTTACGTTAATGGTAAACGGCTTCCTTTGTAACGAAGAGACGCGGGTTCGATTCC
TGCACGGGGCACCA
Downstream region at tRNA end position 
ccgctttcgc
Secondary structure (Cloverleaf model)
>SRA1015283	Thr	TGT
                   t      ACCA ccgctttcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G T C C     A
        A A        A      | | + | |     G
      T     T T G C       G C G G G     C
      G     | | | |                 T T
      G     A A C G
        T A        G     AGAC
                    C - G
                    T - A
                    T - A
                    C - G
                    C   C
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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