The detailed information of tRNA gene sequence


Sequence ID>SRA1015287
Genome IDSRR023845.542083
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 161
End posion on genome 246
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgcccgccc
tRNA gene sequence 
GCGGGCTTGGCGAAACTGGTAGACGCAAGGGACTTAAAAATCCCTCGGTGAAGACCGTGC
GGGTTCGATCCCCGCAGCCCGCACCA
Downstream region at tRNA end position 
ccggacgcgt
Secondary structure (Cloverleaf model)
>SRA1015287	Leu	TAA
                   c      ACCA ccggacgcgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TCGGTGAAGACCGT
                    A   C
                    G - C
                    G - C
                    G + T
                    A   A
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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