The detailed information of tRNA gene sequence


Sequence ID>SRA1015312
Genome IDSRR023846.12918
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 160
End posion on genome 86
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccagctgcct
tRNA gene sequence 
GGATCCTTCGTCTATCGGTCAGGATCGGCCCCTCTCACGGGCCAGAGGAGGGTTCGATTC
CCTCAGGATCTGCCA
Downstream region at tRNA end position 
gcggcacatg
Secondary structure (Cloverleaf model)
>SRA1015312	Glu	CTC
                   t      GCCA gcggcacatg
                     G + T
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     C T C C C     A
      C T A        C      | | | | |     G
    G       T C T G       G A G G G     C
    G       + | | +                 T T
    T       G G A T
      C A          C     AGAG
                    G - C
                    G - C
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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