The detailed information of tRNA gene sequence


Sequence ID>SRA1015329
Genome IDSRR023846.20416
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 9
End posion on genome 83
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nngggtttcc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGTAGAGCACACCCTTCACACGGGTGGGGTCACAGGTTCAATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
gatcgacggc
Secondary structure (Cloverleaf model)
>SRA1015329	Val	CAC
                   c      ACCA gatcgacggc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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