The detailed information of tRNA gene sequence


Sequence ID>SRA1015330
Genome IDSRR023846.21037
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 36
End posion on genome 112
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaccggctt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAT
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
tctcctccaa
Secondary structure (Cloverleaf model)
>SRA1015330	Ile	GAT
                   t      ACCA tctcctccaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T T
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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