The detailed information of tRNA gene sequence


Sequence ID>SRA1015337
Genome IDSRR023846.22775
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 149
End posion on genome 241
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcctcggcat
tRNA gene sequence 
GGAGGCGTCGCCTAGTGGCCTATGGCGCCCGCCTGCTAAGCGGGTTGAGGGGTGATCCTC
CTCTCGCGGGTTCAAATCCCGCCGCCTCCGCCA
Downstream region at tRNA end position 
gttccatccc
Secondary structure (Cloverleaf model)
>SRA1015337	Ser	GCT
                   t      GCCA gttccatccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G C G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGAGGGGTGATCCTCCTCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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