The detailed information of tRNA gene sequence


Sequence ID>SRA1015339
Genome IDSRR023846.24075
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 7
End posion on genome 91
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnncgtgtc
tRNA gene sequence 
TCAGCTGTGGCCGAGCGGTTAAGGCGCTAGATTCAGGTTCTAGTCAACTTTGTTGGCGCG
GGTTCGATTCCCGCCGGATGTACAA
Downstream region at tRNA end position 
ttttttacaa
Secondary structure (Cloverleaf model)
>SRA1015339	Leu	CAG
                   c      ACAA ttttttacaa
                     T   T
                     C - G
                     A - T
                     G   A
                     C - G
                     T + G
                     G - C          T T
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TCAACTTTGTTGGC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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